In the Star Wars EU, what happens after the Second Galactic Civil War?

-Do the Jedi redeem themselves or does the new government still exile them? What happens to the Jedi order that Luke worked so hard to preserve?After that:



After Jedi Knights Bazel Warv and Yaqeel Saav'etu came down with the psychosis, the Galactic Alliance once again attempted to get their hands on the mad Jedi. They failed when Master Cilghal refused to acknowledge a warrant that Daala obtained by manipulating the courts. While acting Grand Master Hamner was favorable to handing over the Jedi, the Council overruled him and decided to take their prisoners to Shedu Maad which was out of the galactic Alliance's reach. Jagged Fel and Jaina Solo then informed them that Daala had recruited Mandalorian Supercommandos to seize the Jedi and make it look like a group of freelancers trying to gain a bounty. The Mandalorians were defeated and the Jedi evacuated. During this time, a team of Jedi traveled with a large contingent of press to a secret Galactic Alliance Security blockhouse where the Horn siblings were being kept. There, they revealed the inequity of Daala's head judge of the Court of Jedi Affairs, Arabelle Lorteli, and also showed the disrespect with which the carbonite-encased Horn's were being treated by the Galactic Alliance. Shortly after, the Jedi managed to smuggle Saav'etu, Warv, Hellin, and Wan offworld to Shedu Maad.



Soon after, Luke Skywalker and his son were attacked by the Lost Tribe of the Sith's strike team at Sinkhole Station in the Maw. They defeated the Sith, allowing only one apprentice, Vestara Khai, to escape. During the battle Luke had put a blood trail on Khai so that they could track her, in hopes of following her back to her homeworld and finding the rest of the Sith.



After her humiliation, Daala retaliated by ordering a squad of Mandalorians to attack the Jedi Temple to stop the Jedi resistance. In the aftermath of the Mandalorians' defeat, several high-profile Jedi Masters and Knights had an arrest warrant issued in their names, such as Master Hamner. In 44 ABY, when a group of Jedi Masters led by Saba Sebatyne decided to take a more aggressive stance against Daala in opposition to Hamner's more lenient policy, the Council dismissed him. When Hamner opposed the launch of Stealth X starfighters to help the Skywalkers, which he viewed as treason against the Order and the Alliance, Sebatyne dueled and killed him, and despite reluctance from her guilt over having killed a fellow Master, Sebatyne accepted the position of Grand Master until Skywalker's return from exile.



By around 130 ABY, the One Sith emerged from the shadows and into open conflict with the Jedi. With the dissolution of the Galactic Alliance, and the Sith joining forces with the new Galactic Empire, the Jedi were steadily losing ground against their foe. The final stroke by the Sith was an all-out attack on the temple at Ossus. Because the Sith attacked before all of them could arrive, about half of the Jedi survived the attack. The Order went into hiding, pursued by both the Sith and by bounty hunters eager to claim the substantial rewards offered for capture of live Jedi. Cade Skywalker, having turned away from his heritage and Jedi training, became a bounty hunter and went so far as to turn in one of his fellow Jedi.



The Third Jedi Purge came to an end when the Battle of Coruscant was won by the allied forces of the Jedi, the Galactic Alliance Remnant and the Fel loyalists. With Darth Krayt's death at the hands of the Jedi Cade Skywalker and the subsequent collapse of the Galactic Empire, the Jedi Order ultimately emerged intact for the most part and was able to assume its former place in the Galaxy once more.
The period shortly after the Second Galactic Civil War is covered by the ongoing Fate of the Jedi series. Since the series isn't finished, we don't have a very clear picture of how things end. Currently Luke (and his son Ben) have been exiled for 10 years, while the Jedi Order still survives.
Why not read all the books to see what happened next?



After the 2nd Galactic War, there was the Yuuzan Vong War,....



This article has a timelime: http://starwars.wikia.com/wiki/Second_Ga鈥?/a>